Usually means: Classification using chemical compound differences.
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We found 11 dictionaries that define the word chemotaxonomy:

General (9 matching dictionaries)
  1. chemotaxonomy: Merriam-Webster
  2. chemotaxonomy: American Heritage Dictionary of the English Language
  3. chemotaxonomy: Collins English Dictionary
  4. chemotaxonomy: Wiktionary
  5. chemotaxonomy: Webster's New World College Dictionary, 4th Ed.
  6. chemotaxonomy: Infoplease Dictionary
  7. chemotaxonomy: Dictionary.com
  8. Chemotaxonomy: Wikipedia, the Free Encyclopedia
  9. chemotaxonomy: TheFreeDictionary.com

Computing (1 matching dictionary)
  1. chemotaxonomy: Encyclopedia

Science (1 matching dictionary)
  1. Agricultural Thesaurus and Glossary (No longer online)

(Note: See chemotaxonomic as well.)

Definitions from Wiktionary (chemotaxonomy)

noun:  (biochemistry, genetics) The classification or taxonomy of organisms based on differences and similarities in biochemistry, especially on differences in amino acid sequence in proteins that the organisms have in common.

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